A DNA sequence can be represented as a string consisting of the letters A, C, G and T, which correspond to the types of successive nucleotides in the sequence. Each nucleotide has an impact factor, which is an integer. Nucleotides of types A, C, G and T have impact factors of 1, 2, 3 and 4, respectively. You are going to answer several queries of the form: What is the minimal impact factor of nucleotides contained in a particular part of the given DNA sequence?
The DNA sequence is given as a non-empty string S = S[0]S[1]...S[N-1] consisting of N characters. There are M queries, which are given in non-empty arrays P and Q, each consisting of M integers. The K-th query (0 ≤ K < M) requires you to find the minimal impact factor of nucleotides contained in the DNA sequence between positions P[K] and Q[K] (inclusive).
For example, consider string S = CAGCCTA and arrays P, Q such that:
P[0] = 2 Q[0] = 4 P[1] = 5 Q[1] = 5 P[2] = 0 Q[2] = 6The answers to these M = 3 queries are as follows:
- The part of the DNA between positions 2 and 4 contains nucleotides G and C (twice), whose impact factors are 3 and 2 respectively, so the answer is 2.
- The part between positions 5 and 5 contains a single nucleotide T, whose impact factor is 4, so the answer is 4.
- The part between positions 0 and 6 (the whole string) contains all nucleotides, in particular nucleotide A whose impact factor is 1, so the answer is 1.
Write a function:
class Solution { public int[] solution(String S, int[] P, int[] Q); }
that, given a non-empty string S consisting of N characters and two non-empty arrays P and Q consisting of M integers, returns an array consisting of M integers specifying the consecutive answers to all queries.
Result array should be returned as an array of integers.
For example, given the string S = CAGCCTA and arrays P, Q such that:
P[0] = 2 Q[0] = 4 P[1] = 5 Q[1] = 5 P[2] = 0 Q[2] = 6the function should return the values [2, 4, 1], as explained above.
Write an efficient algorithm for the following assumptions:
- N is an integer within the range [1..100,000];
- M is an integer within the range [1..50,000];
- each element of arrays P and Q is an integer within the range [0..N - 1];
- P[K] ≤ Q[K], where 0 ≤ K < M;
- string S consists only of upper-case English letters A, C, G, T.
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
System.out.println(ans[0]);
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
System.out.println(gArray[Q[i]]);
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
System.out.println(gArray[Q[i]]);
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
System.out.println(gArray[Q[i]]);
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 3 at Solution.solution(Solution.java:37) at Exec.run(exec.java:50) at Exec.main(exec.java:36)stdout:
0 0
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
System.out.println(gArray[i]);
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
}
System.out.println(gArray[i]);
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
case 'T':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
}
System.out.println(gArray[i]);
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
case 'T':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
['GT', [0, 0, 1], [0, 1, 1]]
class Solution {
public int[] solution(String S, int[] P, int[] Q) {
int[] aArray = new int[S.length()];
int[] cArray = new int[S.length()];
int[] gArray = new int[S.length()];
switch (S.charAt(0)) {
case 'A':
aArray[0]++;
break;
case 'C':
cArray[0]++;
break;
case 'G':
gArray[0]++;
break;
}
for (int i = 1; i <S.length(); i++) {
switch (S.charAt(i)) {
case 'A':
aArray[i] = aArray[i-1] + 1;
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
case 'C':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1] + 1;
gArray[i] = gArray[i-1];
break;
case 'G':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1] + 1;
break;
case 'T':
aArray[i] = aArray[i-1];
cArray[i] = cArray[i-1];
gArray[i] = gArray[i-1];
break;
}
}
int[] ans = new int[P.length];
for (int i = 0; i < P.length; i++) {
if(P[i] == 0){
if(aArray[Q[i]] > 0){
ans[i] = 1;
} else if(cArray[Q[i]] > 0){
ans[i] = 2;
} else if(gArray[Q[i]] > 0){
ans[i] = 3;
} else{
ans[i] = 4;
}
} else{
if(aArray[Q[i]] > aArray[P[i]-1]){
ans[i] = 1;
} else if(cArray[Q[i]] > cArray[P[i]-1]){
ans[i] = 2;
} else if(gArray[Q[i]] > gArray[P[i]-1]){
ans[i] = 3;
} else{
ans[i] = 4;
}
}
}
return ans;
}
}
The solution obtained perfect score.